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Data · dataset · 2025

Gastric Cancer Tissue Single-Cell Sequencing Dataset

Listed in ScienceDB

Description

This dataset contains 4 single-cell sequencing data of gastric cancer tissue samples from patients, including 2 samples from patients undergoing surgical treatment, 1 sample from patients undergoing chemotherapy+immunotherapy+surgical treatment, and 1 sample from patients undergoing chemotherapy+anti angiogenic therapy+immunotherapy+surgical treatment. Fresh tissue samples were washed twice with pre cooled RPMI 1640+0.04% BSA medium under sterile conditions; Then cut it into pieces of about 0.5mm ³, add enzymatic solution and digest it at 37 ℃ for 30 minutes.

During this period, mix it upside down every 10 minutes; The digested cell suspension was filtered twice through a BD 40 μ m cell sieve, centrifuged, and the precipitate was resuspended in culture medium. An equal volume of red blood cell lysis buffer was added, and the supernatant was discarded after centrifugation at 4 ° C for 10 minutes; Wash the precipitate with culture medium and centrifuge again to discard the supernatant.

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Finally, the cell pellet was resuspended in 100 μ l of culture medium and the cell concentration and viability were calculated using a Luna cell counter. Perform single-cell sequencing analysis on the sample using 10 × single-cell transcriptome sequencing technology. 

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Where it is published

Catalogue records · 1

Topics

Inferred from text
Cancer 75% · Oncology and carcinogenesis 74% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 15 field assertions
SourceKeyLast seenRaw
ScienceDB10.57760/sciencedb.296938 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · scidb cnconnector:scidb_cn@1.0.0
concepts[disease].local:disease:cancerenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].anzsrc:group:3211enrichment · scidb cntaxonomy-embedding@1.0.0title+keywords+description (74%)
concepts[field].local:field:earth-environmentalmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:engineeringmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:humanitiesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:life-sciencesmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:medicine-healthmapping · scidb cnconnector:scidb_cn@1.0.0
concepts[field].local:field:social-sciencemapping · scidb cnconnector:scidb_cn@1.0.0
concepts[modality].local:modality:rna-seqenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:sequencingenrichment · scidb cnkeyword-concept-rules@1.0.0title+description (75%)
descriptionsource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/description
licensesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/rights
publication_datesource · scidb cnconnector:scidb_cn@1.0.0
titlesource · scidb cnconnector:scidb_cn@1.0.0/metadata/dc/title