Data · dataset · 2025
Gastric Cancer Tissue Single-Cell Sequencing Dataset
Listed in ScienceDB
Description
This dataset contains 4 single-cell sequencing data of gastric cancer tissue samples from patients, including 2 samples from patients undergoing surgical treatment, 1 sample from patients undergoing chemotherapy+immunotherapy+surgical treatment, and 1 sample from patients undergoing chemotherapy+anti angiogenic therapy+immunotherapy+surgical treatment. Fresh tissue samples were washed twice with pre cooled RPMI 1640+0.04% BSA medium under sterile conditions; Then cut it into pieces of about 0.5mm ³, add enzymatic solution and digest it at 37 ℃ for 30 minutes.
During this period, mix it upside down every 10 minutes; The digested cell suspension was filtered twice through a BD 40 μ m cell sieve, centrifuged, and the precipitate was resuspended in culture medium. An equal volume of red blood cell lysis buffer was added, and the supernatant was discarded after centrifugation at 4 ° C for 10 minutes; Wash the precipitate with culture medium and centrifuge again to discard the supernatant.
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Finally, the cell pellet was resuspended in 100 μ l of culture medium and the cell concentration and viability were calculated using a Luna cell counter. Perform single-cell sequencing analysis on the sample using 10 × single-cell transcriptome sequencing technology.
Links
Where it is published
- DOI doi.org/10.57760/sciencedb.29693 ↗
DOI / persistent id · from scidb cn
Catalogue records · 1
- OAI-PMH record scidb.cn/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=10.57760%2… ↗
metadata API · from scidb cn
Topics
- From keywords
- Earth & Environmental Science · Engineering · Humanities · Life Sciences · Medicine & Health · Social Science
- Inferred from text
- Cancer 75% · Oncology and carcinogenesis 74% · RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ScienceDB | 10.57760/sciencedb.29693 | 8 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].anzsrc:group:3211 | enrichment · scidb cn | taxonomy-embedding@1.0.0 | title+keywords+description (74%) |
| concepts[field].local:field:earth-environmental | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:engineering | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:humanities | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[field].local:field:social-science | mapping · scidb cn | connector:scidb_cn@1.0.0 | |
| concepts[modality].local:modality:rna-seq | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:sequencing | enrichment · scidb cn | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/description |
| license | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/rights |
| publication_date | source · scidb cn | connector:scidb_cn@1.0.0 | |
| title | source · scidb cn | connector:scidb_cn@1.0.0 | /metadata/dc/title |