Omics · study · 2026
The SWI/SNF complex sub-unit Bap60 is required for training-induced gene transcription during long-term memory formation [CUT&Run]
Listed in NCBI GEO
We analyzed transcript-level changes in mushroom body nuclei of Drosophila melanogaster one hour after long-term courtship memory formation in flies with adult-specific RNAi knockdown of SWI/SNF components Bap60, alongside genetic controls.
Description
Here, we identified candidate direct SWI/SNF-regulated genes which were defined as differentially expressed genes overlapping Brm-bound regions identified by CUT&RUN in MB nuclei.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE305nnn/GSE305645 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE305645 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1307409 ncbi.nlm.nih.gov/bioproject/PRJNA1307409 ↗
project · from NCBI GEO
Topics
- Stated by source
- Drosophila melanogaster · Genome binding/occupancy profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 69%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE305645 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:7227 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |