Data · dataset · 2026
Live-cell Phase Contrast image dataset using a balanced class benchmark assay
Listed in Researchdata.se
Description
Dataset generated for 10.1101/2025.04.22.649936 (doi.org/10.1101/2025.04.22.649936) , using an assay with 6 balanced MoA classes. The dataset contains time-lapse images of A549 and U2OS cells. Paired github repository: github.com/edvinforsgren/LCTP The data contains time-lapse images of two cell lines (A549 and U2OS).
The cells were cultivated in an benchmark assay developed for a paper where analysis of a single time-point versus analysis of the full time-lapse was evaluated as a way to determine if adding temporal data could enhance the mined features and improve downstream tasks. The experimental set-up consists of three biological replicates (i.e. three plates with unique layout variants) for each cell-line (A549 and U2OS) with 5 technical replicates (i.e. 5 wells) and 15 DMSO control wells each - for a total of 15 replicates and 45 DMSO replicates for each cell-line.
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The time-lapse acquisition was taken with 2 hours between each acquisition over a duration of 72 hours.
Links
Where it is published
- DOI doi.org/10.17044/scilifelab.29315642 ↗
DOI / persistent id · from researchdata se
Catalogue records · 1
- OAI-PMH record api.researchdata.se/oai-pmh?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3A… ↗
metadata API · from researchdata se
Topics
- From keywords
- Earth & Environmental Science · Medicine & Health
- Inferred from text
- Image 75% · Oncology and carcinogenesis 69%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Researchdata.se | oai:researchdata.se:doi-10-17044-scilifelab-29315642/0 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].anzsrc:group:3211 | enrichment · researchdata se | taxonomy-embedding@1.1.0 | title+keywords+description (69%) |
| concepts[field].local:field:earth-environmental | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata se | connector:researchdata_se@1.0.0 | |
| concepts[modality].local:modality:image | enrichment · researchdata se | keyword-concept-rules@1.0.0 | title+description (75%) |
| description | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/description |
| license | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/rights |
| publication_date | source · researchdata se | connector:researchdata_se@1.0.0 | |
| title | source · researchdata se | connector:researchdata_se@1.0.0 | /metadata/dc/title |