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Omics · study · 2026

Investigating PRELP–TLR2 interactions in the transcriptional control of melanoma immunogenicity

Listed in NCBI GEO

Proline/arginine-rich end leucine-rich repeat protein (PRELP) is an extracellular matrix-associated protein involved in tissue remodeling and immune regulation.

Description

This study investigates PRELP-associated transcriptional changes in human melanoma using bulk RNA sequencing of PRELP-low, PRELP-high, and PRELP + Toll-like receptor 2 (TLR2) co-transfected BUF1088 cells. PRELP-high cells were generated by experimental PRELP overexpression, while the PRELP + TLR2 group was generated by co-transfection with PRELP and TLR2 expression constructs.

Inclusion of the co-transfected samples enables investigation of how TLR2 expression influences PRELP-associated transcriptional programs. Comparative analysis of PRELP-high versus PRELP-low cells revealed broad transcriptomic remodeling, including increased expression of interferon-responsive genes and enrichment of JAK–STAT signaling, chemokine signaling, and MHC class I antigen processing and presentation pathways. These data support a role for PRELP in promoting tumor-intrinsic immune-reactive transcriptional programs and provide a resource for investigating the relationship between extracellular matrix components, TLR2 signaling, and melanoma immune regulation.

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This work was supported by German Research Foundation (DFG) (KS): 558635546 and EFRE Immu-pATienT (BS, CW): ZS/2024/01/183830.

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From keywords
Life Sciences
Inferred from text
RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE3472027 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title