Omics · study · 2026
Dietary serine restriction reduces head and neck cancer cell plasticity through epigenetic changes in the chromatin landscape [RNA-seq]
Listed in NCBI GEO
Head and neck cancer with its major subsite, oral squamous cell carcinoma (OSCC), is a devastating malignancy with limited treatment options.
Description
Given that recent advances in nutritional interventions have been recognized as potential strategies for targeting cancer, we investigated the role of dietary serine restriction in OSCC cell fate decisions. We now report that human OSCC cells behave like serine auxotrophs, depending on exogenous serine to promote growth and sustain plastic cell states, such as cancer stem cells and cells with EMT features.
We show that restriction of serine induces endogenous serine synthesis and generates alpha-ketoglutarate (aKG), a co-substrate for JMJD3 nuclear dioxygenase, which demethylates H3K27me3 and de-represses differentiation genes. This is balanced by the loss of H3K4me3 and inhibition of stemness genes. Likewise, dietary serine restriction inhibits orthotopic OSCC growth in syngeneic mice.
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Our work provides the basis for including precision nutrition to advance treatments for OSCC patients.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE286nnn/GSE286464 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE286464 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1209546 ncbi.nlm.nih.gov/bioproject/PRJNA1209546 ↗
project · from NCBI GEO
- PubMed 41279982 pubmed.ncbi.nlm.nih.gov/41279982 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE286464 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |