Omics · study · 2026
Effect of red meat metabolites and nutrient deprivation on gene expression of HCT116 colorectal cancer cells
Listed in NCBI GEO
Metabolic adaptation allows cancer cells to survive and thrive in changing (nutritional) environments and is therefore a major contributor to cancer progression.
Description
The role of diet herein remains largely unexplored. Red and processed meat consumption is associated to colorectal cancer (CRC), e.g. by the influence of metabolites in the colon lumen.
In this study, the impact of individual and mixtures of meat-derived metabolites on cancer cell metabolic adaptations upon nutritional deprivation is investigated. Using respirometry and transcriptomics, shifts in the ratio of oxidative and glycolytic metabolism were demonstrated upon treatment with hemin (HEM) and kynurenine (KYN). In addition, we found that a combination of HEM and KYN had the strongest impact on the metabolic adaptability during glucose deprivation, potentially supported by stimulated intracellular lipid storage.
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These results reveal an important role of red meat metabolites in cancer cell bioenergetics by acting on key metabolic pathways and show combined effects of HEM and KYN.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE271nnn/GSE271991 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE271991 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1134256 ncbi.nlm.nih.gov/bioproject/PRJNA1134256 ↗
project · from NCBI GEO
- PubMed 41917077 pubmed.ncbi.nlm.nih.gov/41917077 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE271991 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |