Omics · study · 2026
Transcriptomes of Biliary Atresia patients and healthy controls
Listed in NCBI GEO
Biliary atresia (BA) is a poorly understood cholangiopathy, presenting with progressive extra-hepatic bile duct obstruction in newborns.
Description
Using extra-hepatic cholangiocyte organoids originating both from BA patients and normal ducts from patients undergoing liver transplant for metabolic conditions, we aimed to determine the morphological differences between the organoids, compare their transcriptomics profiling and functionally assess differences between the organoids.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE276nnn/GSE276230 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE276230 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1156028 ncbi.nlm.nih.gov/bioproject/PRJNA1156028 ↗
project · from NCBI GEO
- PubMed 42183052 pubmed.ncbi.nlm.nih.gov/42183052 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE276230 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |