Omics · study · 2026
Thymic lymphomas induced by high-LET carbon-ion irradiation in B6C3F1 mice
Listed in NCBI GEO
Female B6C3F1 mice were received 4 doses (1 dose per week) of whole-body 1.6 Gy carbon ions starting at age 4–5 weeks.
Description
Each irradiation was conducted with a 290 MeV/u carbon-ion beam (average LET 60 keV/µm) at the Heavy Ion Medical Accelerator in Chiba, Japan. The mice were monitored throughout their lifespan.
Thymic lymphomas obtained from these mice were analyzed to identify characteristic genomic alterations induced by carbon-ion irradiation. The results revealed that thymic lymphomas arising after four-fractionated high-LET carbon-ion irradiation frequently exhibited loss of heterozygosity in the region containing the thymic lymphoma–associated gene Ikzf1 on chromosome 11, due to extensive genomic deletions.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE305nnn/GSE305546 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE305546 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1306487 ncbi.nlm.nih.gov/bioproject/PRJNA1306487 ↗
project · from NCBI GEO
- PubMed 42090560 pubmed.ncbi.nlm.nih.gov/42090560 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Genome variation profiling by array · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE305546 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-variation-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |