Omics · study · 2026
Modelling mental disorders in zebrafish. Neurexins severely modulate anxiety, social behaviors and aggression
Listed in NCBI GEO
We generated a comprehensive collection of zebrafish neurexin knockout lines covering all family members, including alleles with transmembrane domain disruptions and deletions covering full genomic locus and partial gene region.
Description
All homozygous mutants were viable and showed no gross developmental abnormalities, enabling molecular profiling despite later‑onset behavioural phenotypes. This resource includes defined nrxn1a-nrxn1b, nrxn2a-nrxn2b, and nrxn3a-nrxn3b double gene mutant lines and provides a vertebrate model to investigate paralog‑specific consequences of neurexin loss of function.
The RNA‑seq FASTQ files deposited in this GEO submission were generated from these neurexin mutant and matched control zebrafish and support analysis of transcriptional changes associated with neurexin deficiency.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE324nnn/GSE324987 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE324987 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1438185 ncbi.nlm.nih.gov/bioproject/PRJNA1438185 ↗
project · from NCBI GEO
- PubMed 42362769 pubmed.ncbi.nlm.nih.gov/42362769 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Danio rerio · Expression profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE324987 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:7955 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |