Table · dataset · 2026
Table 1_The crotonylation reader DPF2 promotes the development and progression of colon adenocarcinoma through cell-type-specific immune regulation and metabolic reprogramming.xlsx
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Description
Background<p>The crotonylation reader DPF2 has been implicated in tumor progression, but its role in colon adenocarcinoma (COAD), especially in cell-type-specific immune regulation and metabolic reprogramming, remains unclear.</p>Methods<p>We conducted an integrative multi-omics study combining genetic association analysis for COAD, public transcriptomic validation data, CRC-context single-cell and spatial transcriptomic datasets used as supportive expression evidence, circulating metabolite profiling, and clinical immunohistochemistry.
Two-sample Mendelian randomization was used to evaluate the association between genetically predicted expression of crotonylation-related genes and COAD risk, followed by validation and mechanistic analyses centered on DPF2.</p>Results<p>Among 16 crotonylation-related candidate genes with available cis-eQTL evidence, only DPF2 showed a significant positive association with COAD risk. DPF2 was consistently upregulated in GEO datasets, TCGA-COAD, and clinical samples, and high DPF2 expression was associated with advanced disease and poor overall survival.
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Single-cell MR identified the strongest risk-associated signal in TCL1A<sup>+</sup> FCER2<sup>+</sup> B cells, with a suggestive association in CD8<sup>+</sup> S100B<sup>+</sup> T cells. Supportive analyses using public CRC-context single-cell and spatial transcriptomic datasets further indicated heterogeneous immune-cell expression and tumor-region enrichment of DPF2. In addition, DPF2 was significantly associated with 11 COAD-related circulating metabolites, and mediation analyses suggested partial mediation through Ximenoylcarnitine (C26:1), 16α-hydroxy DHEA 3-sulfate, and Andro steroid monosulfate C19H28O6S (1).</p>Conclusion<p>DPF2 is a crotonylation reader associated with COAD risk and progression.
Its effects may involve cell-type-specific immune regulation and partial mediation through metabolic reprogramming. While the primary causal inference of this study focused on COAD, complementary single-cell and spatial transcriptomic findings from broader CRC datasets provided supportive expression-level evidence consistent with these associations.</p>
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Where it is published
- DOI doi.org/10.3389/fphar.2026.1835967.s001 ↗
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Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
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Topics
- From keywords
- Astronomy & Astrophysics · Chemistry · Computer Science & AI · Earth & Environmental Science · Economics & Finance · Engineering · Humanities · Life Sciences · Medicine & Health · Ocean & Atmospheric Science · Social Science
- Inferred from text
- Cancer 65% · Disease 75% · Oncology and carcinogenesis 73% · Tabular 65%
Provenance · 1 source records, 20 field assertions
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| figshare | oai:figshare.com:article/33922459 | 12 d ago | JSON v1 |
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