Data · study · 2026
Chimeric AGO2-miR-eCLIP analysis of LIMD1 deficient (CRISPR-Cas9 edited) human SAEC cells
Listed in NCBI GEO
To assess AGO2:miRNA:target interactions under LIMD1 deficiency, we performed chimeric AGO2-miR-eCLIP on CRISPR-edited hSAECs.
Description
This technique ligates miRNAs to their AGO2-bound targets, capturing endogenous AGO2:miRNA:target complexes. After successful IP with anti-AGO2 antibody, post-processing mapped reads were identified as AGO2-miRNA, AGO2-mRNA, or chimeric peaks.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE304nnn/GSE304955 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE304955 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1303594 ncbi.nlm.nih.gov/bioproject/PRJNA1303594 ↗
project · from NCBI GEO
- PubMed 42490457 pubmed.ncbi.nlm.nih.gov/42490457 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE304955 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |