Omics · study · 2026
Machine Learning-Based Diagnosis of Adenomyosis Uteri Using Serum and Urine miRNA Profiles
Listed in NCBI GEO
Description
Background
Adenomyosis uteri is a chronic gynecological condition frequently coexisting with endometriosis, presenting significant diagnostic challenges due to overlapping symptoms and limitations in imaging techniques. There is a pressing need for reliable, non-invasive biomarkers to enhance diagnostic accuracy and improve patient care. Objective: This pilot study investigated the diagnostic potential of serum and urine microRNA (miRNA) profiles for adenomyosis using machine learning approaches.
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Methods
Serum and urine samples were collected from 59 patients undergoing surgery for chronic pelvic pain at the Endometriosis Center, RWTH Aachen University Hospital. Among them, 7 had isolated adenomyosis, 34 had histologically confirmed endometriosis, and 18 served as negative controls. miRNA profiling was conducted via next-generation sequencing. A comprehensive feature selection pipeline—including variance filtering, univariate testing, mutual information, and recursive feature elimination—was used to reduce dimensionality.
Classification models (Logistic Regression, Random Forest, Support Vector Machine, and Decision Tree) were trained with cross-validation and evaluated using accuracy, precision, recall, F1 score, and ROC-AUC.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE298nnn/GSE298298 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE298298 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1268905 ncbi.nlm.nih.gov/bioproject/PRJNA1268905 ↗
project · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Non-coding RNA profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Imaging 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE298298 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:non-coding-rna-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:imaging | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |