Excel · study · 2026
Cross-Platform Transcriptomic Validation Identifies SERPINB2 as a Chondrogenic Biomarker and Reveals Coordinated Suppression of DPP4 During Cartilage Lineage Commitment
Listed in NCBI GEO
Human mesenchymal stem cells (hMSCs) are a promising source for regenerative medicine, especially mesodermal lineages.
Description
Clinical applications require an understanding of the mechanisms for transcriptional control to maintain the desired cell type. The aim of this study was to identify novel markers for differentiation of cartilage with the use of Kartogenin, by RNA analysis using microarray technology.
Results: We found genes that were either up- or downregulated on differentiation, when compared to PI hMSC (control) at day 0 of differentiation. SERPINB2, was significantly upregulated in the cartilage groups,The most significant hits were validated by quantitative polymerase chain reaction
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE325nnn/GSE325419 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE325419 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1439890 ncbi.nlm.nih.gov/bioproject/PRJNA1439890 ↗
project · from NCBI GEO
- PubMed 42625795 pubmed.ncbi.nlm.nih.gov/42625795 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by array · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE325419 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-array | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |