Omics · study · 2026
Pivotal Role of the NuRD Complex in Remodeling Chromatin Environment and Maintaining Genome Architecture at CTCF Sites [BS-seq]
Listed in NCBI GEO
The currently available data of CTCF binding in mammalian cells are exclusively obtained with ChIP-seq.
Description
In order to fully retain the dynamic information of CTCF binding, we have developed a new method called GpC-Methylation Assisted Tracing (G-MAT) of a nuclear protein, which leverages DNA cytosine methylation to record the footprints of a protein within a given period of time.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE176nnn/GSE176248 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE176248 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA735625 ncbi.nlm.nih.gov/bioproject/PRJNA735625 ↗
project · from NCBI GEO
- PubMed 42225060 pubmed.ncbi.nlm.nih.gov/42225060 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Methylation profiling by high throughput sequencing
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE176248 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:methylation-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |