Omics · study · 2026
Porphyromonas gingivalis Sphingolipids Affect Early Responses of Macrophages to Outer Membrane Vesicles (OMVs)
Listed in NCBI GEO
We performed a transcriptomic analysis of macrophages co-cultured with either WT or SL-null P. gingivalis OMVs for 2 hours to analyze the differentially expressed genes between the Untreated cells (Control) and the cells treated with the different OMVs.
Description
Total RNA was extracted from THP-1cells only, or co-cultured with WT or SL-null P. gingivalis OMVs.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE313nnn/GSE313285 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE313285 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1378875 ncbi.nlm.nih.gov/bioproject/PRJNA1378875 ↗
project · from NCBI GEO
- PubMed 42405943 pubmed.ncbi.nlm.nih.gov/42405943 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE313285 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |