Omics · study · 2026
Positive and Negative Selection of abT cells (OT-I and OT-II) in the thymus 1 -scRNA-seq, CITE-seq and TCRab [I58]
Listed in NCBI GEO
This study is part of the immgenT Open Source Project, specifically from IGT58, focuses on the positive and negative selection of OT1 and OT2 in the thymus.
Description
Bone marrow chimeras were generated by transplanting OT1 or OT2 CD45.1.2 and wild-type competitor BM into wild-type, RIPmOVA, B2m -/- or MHCII -/- hosts. From those mice, OT1 and OT2, not selected, positively selected, or negatively selected, were profiled.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE330nnn/GSE330896 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330896 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1465879 ncbi.nlm.nih.gov/bioproject/PRJNA1465879 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE330896 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |