Omics · study · 2026
In vitro 3D model of the immune-oncology stromal barrier for evaluating T-cell accumulation and cytotoxicity
Listed in NCBI GEO
To evaluate the efficacy of cancer immunotherapies, infiltration into the tumor and the recognition and attack of cancer cells by T cells ex vivo must be assessed.
Description
However, few available in vitro experimental systems can assess T-cell infiltration into tumor tissues in a manner that structurally mimics the tumor tissue due to difficulties in controlling cell position. Here, we developed a stacked three-dimensional (3D) stromal tissue using a cell-assembled viscous tissues method.
Stromal tissues, including cancer-associated fibroblasts (CAFs), created a stromal barrier that prevented cytotoxic T cells from attacking cancer cells. Drug screening using the CAF model demonstrated that HDAC inhibitors promote T-cell infiltration and its combined effects and suppress extracellular matrix formation and CAF expression by acting on fibroblasts. Thus, the stromal barrier–inclusive co-culture model that partially reproduces CAF-induced cold tumors could facilitate the development of drugs that promote immune cell infiltration and cell-cell interaction studies.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE289nnn/GSE289926 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE289926 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1225310 ncbi.nlm.nih.gov/bioproject/PRJNA1225310 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE289926 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |