Omics · study · 2026
Long-read (ONT) RNA-seq of Insr/Igf1r double-knockout and wild-type mouse podocytes — Related to eLife paper The insulin / IGF axis is critically important for controlling gene transcription in the podocyte.
Listed in NCBI GEO
Podocyte integrity depends critically on signalling through the insulin receptor and IGF1 receptor, and this study defines their combined importance using dual receptor knockdown in mice and cultured podocytes.
Description
Podocyte specific reduction of both receptors in transgenic mice caused kidney disease characterised by albuminuria and glomerulosclerosis, with premature death occurring in some animals between 4 and 24 weeks. Receptor deficient cultured podocytes exhibited >50% cell loss within 7 days.
Integrated proteomic and transcriptomic analyses revealed marked depletion of spliceosome associated proteins and widespread intron retention with premature termination codons, indicating profound disruption of RNA processing. Phospho proteomic profiling further showed that insulin/IGF1 stimulation induces dynamic post translational modifications across spliceosomal components and regulatory kinases. Together, these findings uncover a previously unrecognised role for podocyte insulin/IGF1 signalling in maintaining spliceosomal integrity and transcriptional fidelity, establishing this hormonal axis as a key extrinsic regulator of podocyte gene expression.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE345nnn/GSE345955 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345955 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1522455 ncbi.nlm.nih.gov/bioproject/PRJNA1522455 ↗
project · from NCBI GEO
- PubMed 42695984 pubmed.ncbi.nlm.nih.gov/42695984 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE345955 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |