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Data · dataset · 2020

Table 1 Extended data: Ubiquitylome of developing cortical neurons

Listed in CaltechDATA

Ubiquitylome of four mouse genotypes and netrin treatment in triplicate.

Description

These data is composed of a list of 854 unique proteins and 1454 unique peptides that were ubiquitylated during early neuronal development. The data are represented in sheets that include gene names of identified proteins with NCBI identifiers; the peptide sequences identified by MS; the peptides with ubiquiylated lysine; the number of glycine adducts per peptide; the types of samples (genotype and netrin treatment) and replicates; and median subtracted intensity before and after batch correction.

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Where it is published

Catalogue records · 1

Topics

Inferred from text
Biochemistry and cell biology 69% · Tabular 65%
Provenance · 1 source records, 22 field assertions
SourceKeyLast seenRaw
CaltechDATAw88h2-2q26411 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · data caltech educonnector:data_caltech_edu@1.0.0
concepts[field].anzsrc:group:3101enrichment · data caltech edutaxonomy-embedding@1.0.0title+keywords+description (69%)
concepts[field].local:field:earth-environmentalmapping · data caltech educonnector:data_caltech_edu@1.0.0
concepts[field].local:field:engineeringmapping · data caltech educonnector:data_caltech_edu@1.0.0
concepts[field].local:field:humanitiesmapping · data caltech educonnector:data_caltech_edu@1.0.0
concepts[field].local:field:life-sciencesmapping · data caltech educonnector:data_caltech_edu@1.0.0
concepts[field].local:field:social-sciencemapping · data caltech educonnector:data_caltech_edu@1.0.0
concepts[modality].local:modality:tabularenrichment · data caltech edukeyword-concept-rules@1.0.0title+description (65%)
concepts[organism].NCBITaxon:10090mapping · data caltech eduvocabulary-mapper@1.0.0keywords['mouse']
concepts[topic].invenio_subject:data_caltech_edu:cortical-neuronssource · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:e3-ubiquitin-ligasesource · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:mousesource · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:trim67source · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:trim9source · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:ubiquitinsource · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:ubiquitylationsource · data caltech educonnector:data_caltech_edu@1.0.0
concepts[topic].invenio_subject:data_caltech_edu:ubiquitylomesource · data caltech educonnector:data_caltech_edu@1.0.0
descriptionsource · data caltech educonnector:data_caltech_edu@1.0.0/metadata/description
publication_datesource · data caltech educonnector:data_caltech_edu@1.0.0
titlesource · data caltech educonnector:data_caltech_edu@1.0.0/metadata/title
updated_datesource · data caltech educonnector:data_caltech_edu@1.0.0
version_labelsource · data caltech educonnector:data_caltech_edu@1.0.0