Omics · study · 2026
BHLHE40 role in hepatocytes exposed to high sugar content
Listed in NCBI GEO
BHLHE40/DEC1 is a basic helix-loop-helix transcription factor (TF) that regulates circadian rhythm and T cell responses.
Description
In hepatocytes, its function and cooperativity with other TFs are poorly understood. Employing genome-wide approached, we show that its genomic binding strongly overlapped with that of carbohydrate response-element binding protein (ChREBP), a sugar sensing TF and known inducer of BHLHE40 expression.
Transcriptomic analysis of primary mouse hepatocytes revealed a pervasive repressive role for BHLHE40 on genes involved in genomic stability. Bhlhe40 depletion potentiated fructose responsiveness of genes involved in cell cycle regulation. Strikingly, genomic binding of BHLHE40 overlapped with enhancers occupied by PPARα, RXRα, and HNF4 nuclear receptors and BHLHE40 fine-tuned the expression of PPARα target genes.
Read the rest (1 more)
Consistently, BHLHE40 physically interacted with RXRα and proteins of PPARα-related regulators. Collectively, our data suggest that through cooperation with ChREBP and nuclear receptors, BHLHE40 is a central regulator of hepatic gene expression with potential to integrate inputs from nutrient signals contributing to the metabolic flexibility of the liver.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE316nnn/GSE316769 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE316769 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1404174 ncbi.nlm.nih.gov/bioproject/PRJNA1404174 ↗
project · from NCBI GEO
- PubMed 42626966 pubmed.ncbi.nlm.nih.gov/42626966 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE316769 | 15 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |