Omics · study · 2026
Investigate changes in gene expression and enriched pathways in endothelial cells following Liver endothelial Heg1 knockout.
Listed in NCBI GEO
Knockout of Heart-of-glass (Heg) in liver endothelial cells alters the metabolic patterns of hepatocytes.
Description
To further investigate whether endothelial cells regulate hepatocyte function and gene expression patterns by secreting certain proteins or factors mediated by Heg1, we collected mice at postnatal days 3 (P3) and 42 (P42), isolated liver endothelial cells, and performed RNA-seq analysis to explore the interaction patterns between endothelial cells and hepatocytes.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE315nnn/GSE315829 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE315829 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1399383 ncbi.nlm.nih.gov/bioproject/PRJNA1399383 ↗
project · from NCBI GEO
- PubMed 42119921 pubmed.ncbi.nlm.nih.gov/42119921 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE315829 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |