Excel · study · 2026
V-ATPase-Driven Lysosomal Activation Orchestrates MEK2-Induced Endothelial Reprogramming
Listed in NCBI GEO
Direct lineage reprogramming holds therapeutic promise but often depends on transcription factor overexpression, resulting in unstable phenotypes.
Description
Here, we use RNA-sequencing to characterize a novel strategy converting fibroblasts into endothelial-like cells through activation of lysosomal activity. Constitutively active MEK2 induces a transcriptional endothelial gene program via sustained MAPK/ERK signaling, leading to enhanced vacuolar ATPase (V-ATPase) activity, lysosomal acidification, extracellular matrix degradation, and angiogenic behavior.
Transcriptomic profiling reveals that V-ATPase inhibition impairs induction of endothelial gene expression, whereas pharmacologic V-ATPase activation with EN6 recapitulates key transcriptional features of reprogramming and promotes nuclear translocation of TFEB, a master lysosomal regulator. Consistently, TFEB overexpression, particularly a phospho-deficient mutant, boosts lysosomal gene expression and enhances the endothelial transcriptional signature.
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This dataset defines a MAPK–V-ATPase–TFEB axis driving endothelial reprogramming at the transcriptional level and provides a resource for exploring the lysosome as a central hub for cell fate transitions
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE339nnn/GSE339221 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE339221 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1498002 ncbi.nlm.nih.gov/bioproject/PRJNA1498002 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE339221 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |