Omics · study · 2026
TurbOmics: a web-based platform for the analysis of metabolomics data using a multi-omics integrative approach.
Listed in NCBI GEO
Multi-omics integration is highly effective for the holistic characterization of biological systems.
Description
However, current bioinformatics tools face limitations when incorporating metabolomics data, particularly for handling untargeted annotation, and when providing alternatives to predefined knowledge bases. Advanced algorithms required for multi-omics integration typically demand programming skills and statistical background, restricting their use to specialized users.
Here, we introduce TurbOmics, a user-friendly web-based platform that enables researchers with diverse backgrounds to analyze metabolomics, proteomics, and transcriptomics data using an integrative workflow that includes advanced algorithms for multi-omics integration, while addressing key challenges associated with metabolomics data. The platform is available at proteomics.cnic.es/TurboPutative/TurbOmicsApp.html.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE343nnn/GSE343110 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE343110 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1510554 ncbi.nlm.nih.gov/bioproject/PRJNA1510554 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Mass spectrometry 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE343110 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:mass-spectrometry | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |