Omics · study · 2026
RNA Sequencing of Lung Tissue in FTO-Overexpressing Mice Modeling Chronic Obstructive Pulmonary Disease
Listed in NCBI GEO
Fat mass and obesity-associated protein (FTO) is linked to various diseases; however, its role in COPD remains unclear.
Description
We previously found that the expression level of FTO was significantly decreased in COPD models. To explore the downstream target genes and pathways of FTO, we conducted RNA sequencing on lung tissues from wild-type and FTO-overexpressing mice exposed to cigarette smoke.
Here, we report that FTO plays a crucial role in regulating inflammation in COPD. We demonstrated that FTO expression can modulate several pathways, including the PI3K-Akt and MAPK signaling pathways, which are associated with inflammation. Transcriptomic analysis further revealed FTO-dependent alterations in genes associated with inflammation.
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Overall, our study enhances the understanding of the molecular mechanisms by which FTO contributes to the regulation of inflammation in COPD.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE305nnn/GSE305761 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE305761 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1307564 ncbi.nlm.nih.gov/bioproject/PRJNA1307564 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Disease 75% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE305761 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:disease | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |