Table · dataset · 2026
Additional files: Manuscript titled "<b>Haplotype diversity and variant switching associated with long-term transmission and outbreak dynamics of Dengue virus 3 genotype III lineages</b>"
Listed in ZivaHub and Deakin Research Online and HKU DataHub and DaYta Ya Rona and figshare and Loughborough Research Repository and UP Research Data Repository — shown once because both records carry DOI 10.6084/m9.figshare.33413509.v3
<p dir="ltr">Despite improvements in genomic surveillance coverage in dengue endemic settings, there is limited literature on the long-term evolutionary dynamics of DENV lineages that contribute to epidemics in hyperendemic settings.
Description
The present study aimed to address this knowledge gap by analysing serially collected DENV genomic surveillance data in Singapore, where DENV populations have closely been monitored since 2006 to facilitate outbreak risk assessment.
The study investigated the long-term temporal dynamics of two DENV-3 genotype III lineages associated with two outbreaks in Singapore during 2019-2022. We hypothesized that the two lineages differ in intra-lineage haplotype composition, substitution patterns and temporal dynamics, and that overall diversity scales in parallel to transmission intensity.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.33413509.v3 ↗
DOI / persistent id · from zivahub uct ac za
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from zivahub uct ac za
Topics
- From keywords
- Astronomy & Astrophysics · Chemistry · Chemistry · Computer Science & AI · Computer Science & AI · Disease surveillance · Disease surveillance · Disease surveillance · Disease surveillance · Disease surveillance · Disease surveillance · Disease surveillance · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Earth & Environmental Science · Economics & Finance · Economics & Finance · Engineering · Engineering · Engineering · Engineering · Environmental epidemiology · Environmental epidemiology · Environmental epidemiology · Environmental epidemiology · Environmental epidemiology · Environmental epidemiology · Environmental epidemiology · Humanities · Humanities · Humanities · Humanities · Life Sciences · Life Sciences · Life Sciences · Life Sciences · Life Sciences · Life Sciences · Life Sciences · Materials Science · Mathematics & Statistics · Medicine & Health · Medicine & Health · Medicine & Health · Medicine & Health · Medicine & Health · Medicine & Health · Medicine & Health · Ocean & Atmospheric Science · Phylogeny and comparative analysis · Phylogeny and comparative analysis · Phylogeny and comparative analysis · Phylogeny and comparative analysis · Phylogeny and comparative analysis · Phylogeny and comparative analysis · Phylogeny and comparative analysis · Psychology & Behavioral Science · Social Science · Social Science · Social Science · Social Science
Provenance · 7 source records, 70 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| ZivaHub | oai:figshare.com:article/33413509 | 7 d ago | JSON v1 |
| Deakin Research Online | oai:figshare.com:article/33413509 | 7 d ago | JSON v1 |
| HKU DataHub | oai:figshare.com:article/33413509 | 7 d ago | JSON v1 |
| DaYta Ya Rona | oai:figshare.com:article/33413509 | 7 d ago | JSON v1 |
| figshare | oai:figshare.com:article/33413509 | 6 d ago | JSON v1 |
| Loughborough Research Repository | oai:figshare.com:article/33413509 | 6 d ago | JSON v1 |
| UP Research Data Repository | oai:figshare.com:article/33413509 | 6 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].anzsrc:field:310410 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:310410 | mapping · dayta nwu ac za | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:310410 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:310410 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:310410 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:310410 | mapping · researchdata up ac za | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:310410 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Phylogeny and comparative analysis'] |
| concepts[field].anzsrc:field:420202 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420202 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420202 | mapping · dayta nwu ac za | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420202 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420202 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420202 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420202 | mapping · researchdata up ac za | vocabulary-mapper@1.0.0 | keywords['Disease surveillance'] |
| concepts[field].anzsrc:field:420203 | mapping · figshare com | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].anzsrc:field:420203 | mapping · researchdata up ac za | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].anzsrc:field:420203 | mapping · repository lboro ac uk | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].anzsrc:field:420203 | mapping · zivahub uct ac za | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].anzsrc:field:420203 | mapping · datahub hku hk | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].anzsrc:field:420203 | mapping · dro deakin edu au | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].anzsrc:field:420203 | mapping · dayta nwu ac za | vocabulary-mapper@1.0.0 | keywords['Environmental epidemiology'] |
| concepts[field].local:field:astronomy | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:chemistry | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:computer-science-ai | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:economics-finance | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:engineering | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:engineering | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:engineering | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:humanities | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:humanities | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:humanities | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:materials-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:mathematics-statistics | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · dro deakin edu au | connector:dro_deakin_edu_au@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · datahub hku hk | connector:datahub_hku_hk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:ocean-atmospheric | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| concepts[field].local:field:social-science | mapping · dayta nwu ac za | connector:dayta_nwu_ac_za@1.0.0 | |
| concepts[field].local:field:social-science | mapping · figshare com | connector:figshare_com@1.0.0 | |
| concepts[field].local:field:social-science | mapping · researchdata up ac za | connector:researchdata_up_ac_za@1.0.0 | |
| concepts[field].local:field:social-science | mapping · repository lboro ac uk | connector:repository_lboro_ac_uk@1.0.0 | |
| description | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/description |
| license | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/rights |
| publication_date | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | |
| title | source · zivahub uct ac za | connector:zivahub_uct_ac_za@1.0.0 | /metadata/dc/title |