Omics · study · 2026
Methionine Deprivation-induced Reprogramming of Hepatic Rhythms Is Partially Mediated by Glucocorticoid Receptor [RNAseq-TRF]
Listed in NCBI GEO
The circadian clock tightly interacts with cellular metabolism, and nutritional challenges can profoundly remodel its function.
Description
Dietary methionine restriction has been shown to improve metabolic health and extend lifespan. However, whether and how dietary methionine restriction impacts the circadian clock is unclear.
Here, we demonstrate that methionine deprivation (MD) induces dramatic alterations in two signaling systems that input to the circadian clock: de novo oscillation of circulating FGF21 coupled with increased amplitude of glucocorticoid oscillations. These alterations in signaling result in a remarkable reprogramming of the hepatic circadian transcriptome and epigenetic landscape. The epigenetic and transcriptomic alterations result from dramatic remodeling of the rhythmic binding of the glucocorticoid receptor (GR) to chromatin as they are abolished by liver-specific deletion of GR.
Read the rest (1 more)
These results demonstrate that dietary methionine restriction remodels the circadian rhythms alterations in the biological program initiated by glucocorticoid receptor.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE288nnn/GSE288647 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE288647 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1218784 ncbi.nlm.nih.gov/bioproject/PRJNA1218784 ↗
project · from NCBI GEO
- PubMed 42465318 pubmed.ncbi.nlm.nih.gov/42465318 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE288647 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |