Omics · study · 2026
Transcriptional profile of Influenza H3-specific memory B cells following LAIV vaccination [LAIV.bulkRNAseq]
Listed in NCBI GEO
Live attenuated influenza vaccination (LAIV) is the only FDA approved mucosal vaccine.
Description
Here, we determined the transcriptional profile of circulating memory B cell subsets that arise 14 days after LAIV vaccination. We used the expression of FcRL5 as a surrogate marker of Tbet+ memory B cells to compare the differences between these memory subsets.
Influenza HA-B-cell tetramers were used to isolate vaccine-specific circulating cells for RNA-seq. These data highlight the differences and similarities between memory B cell subsets that arise following mucosla and intramuscular vaccination.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE314nnn/GSE314199 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE314199 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1390242 ncbi.nlm.nih.gov/bioproject/PRJNA1390242 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE314199 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |