Text · study · 2026
AAV capsid evolution in human T cells identifies a family of CD7-targeting variants for efficient T and NK cell engineering [CRISPR screen]
Listed in NCBI GEO
Precise genome engineering of human T cells, such as targeted integration of large transgenes into human T cells via homology-directed repair (HDR), has revolutionized adoptive cell therapies and deepened our understanding of T cell biology.
Description
Adeno-associated virus (AAV) vectors are used to deliver HDR templates into T cells, but the limited tropism of naturally occurring AAV serotypes remains a major barrier to efficient genetic manipulation in these cells.
To overcome this challenge, we performed directed evolution of the AAV6 capsid and identified a new family of variants containing an Alanine-Proline-Arginine (APR) motif, with AAV.APR31 (also termed HONG31) emerging as one of the lead candidates. AAV.APR31 exhibited markedly enhanced transduction efficiency in human T cells, even at substantially lower vector doses compared to AAV6. Using genome-wide CRISPR-Cas9 knockout screens in human T and B lymphocytes, we identified CD7 as an essential gene required for AAV.APR31 transduction in T lymphocytes and NK cells.
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Structural analyses revealed that the APR substitution induced a spatial conformation change in the capsid surface, repositioning the VR-IV domain to improve accessibility and cooperative binding with CD7. We further demonstrate that AAV.APR31 enables robust transgene delivery, supports high-efficiency CRISPR-Cas9-mediated knock-in of large constructs at multiple genomic loci, and facilitates AAV-transposon-mediated DNA integration.
Notably, AAV.APR31 has been successfully applied to generate a variety of therapeutic immune cell products, including conventional CAR-T cells, bispecific CAR-T cells, synthetic TCR-T cells, and CAR-NK cells. The development of these synthetic capsids expands the toolbox for precise genome engineering and holds strong translational potential for both basic research and next-generation human T and NK cell-based cellular immunotherapies.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE302nnn/GSE302084 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE302084 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1288491 ncbi.nlm.nih.gov/bioproject/PRJNA1288491 ↗
project · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Other
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE302084 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |