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Omics · study · 2026

Ginsenoside F1 improves mitochondrial energy metabolism through regulating gut microbiota-induced bile acid homeostasis [RNA-Seq]

Listed in NCBI GEO

This study investigates the effects of ginsenoside F1 (GF1), a rare ginsenoside, on metabolic syndrome (MetS) in a high‑fat diet (HFD)‑induced mouse model.

Description

Male C57BL/6 mice were fed a HFD for 8 weeks to establish MetS and then treated with GF1 at 50 or 100 mg/kg/day for 12 weeks, alongside chow‑fed controls. Metabolic phenotypes were assessed via indirect calorimetry, serum biochemical assays, histopathological examination, and oral glucose tolerance tests.

To elucidate the underlying mechanisms, we performed a comprehensive multi‑omics and functional analysis, including RNA‑sequencing of liver and subcutaneous white adipose tissue (sWAT), 16S rRNA gene sequencing of gut microbiota from fecal samples, targeted metabolomics for bile acid profiling in liver tissues, flow cytometry for immune cell phenotyping in blood, liver, and stromal vascular fraction of adipose tissue, as well as Western blotting and immunohistochemistry for protein validation.

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This dataset provides extensive transcriptomic, microbiomic, and metabolomic data to evaluate the potential mechanisms of GF1 in modulating energy metabolism, mitochondrial function, inflammation, and gut microbiota–bile acid crosstalk in the context of diet‑induced MetS.

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From keywords
Life Sciences
Inferred from text
RNA sequencing 65% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE34254512 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title