Omics · study · 2026
NR2F1 regulates coding and noncoding transcriptome essential for spermatogonia establishment and maintenance [ChIP-seq]
Listed in NCBI GEO
The formation, self-renewal and differentiation properties of spermatogonia are essential for male fertility maintenance.
Description
Here, we reported NR2F1, a transcription factor starting its expression in fetal testis, is indispensable during mammalian spermatogonia development. Conditional knockout of Nr2f1 led to the loss of mouse pro-spermatogonia, impaired spermatogenesis and finally resulted in male infertility.
Using human spermatogonial stem cells (hSSCs) in vitro differentiation system, we demonstrated that NR2F1 not only regulate expression of several prominent spermatogonia protein-coding genes, but also regulate a subset of lncRNAs associated with chromatin remodeling. Deletion of NR2F1 impaired hSSCs proliferation rate and induced abnormal histone modification level at specific genomic loci. Three mutations are identified at the N-terminal of NR2F1 in non-obstructive azoospermia (NOA) patients and co-immunoprecipitation analyses revealed that these mutant NR2F1 fail to recruit co-factors involved in transcription initiation, thus impairing spermatogonia development.
Read the rest (1 more)
Cumulatively, our study unveiled the functional role of NR2F1 in regulating mammalian spermatogonia development.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE274nnn/GSE274170 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE274170 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1145335 ncbi.nlm.nih.gov/bioproject/PRJNA1145335 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE274170 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |