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Omics · study · 2026

RNA Sequencing of Mouse Liver Post Caloric Resrtiction and Anti-Anging Interventions

Listed in NCBI GEO

Caloric restriction (CR) extends lifespan in mammals but the stringent 20% reduction in food intake is challenging to sustain; therefore, validating pharmacological mimics is of high interest.

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It has been previously reported that a SERPINE1 mutation in an Amish cohort links to a 10-year lifespan increase and improved metabolism. SERPINE1 encodes for Plasminogen Activator Inhibitor-1 (PAI-1) which is a clinical predictor of vascular stiffness, hypertension, and diastolic dysfunction.

Moreover, PAI-1 amplifies accumulation of senescent cells as a component of the senescence associated secretory phenotype (SASP). Here, we compared hepatic transcriptomic profiles in mice after 8 weeks of CR, rapamycin, metformin, or the PAI-1 inhibitor TM5614 versus an ad libitum control. CR induced extensive changes (1087 genes downregulated, 1145 upregulated), while TM5614 showed the closest mimicry (211 down, 218 up), sharing ~50% of CR’s differentially expressed genes, including downregulated Il11ra1 and upregulated Per2, tied to longevity and metabolism.

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Rapamycin and metformin showed minimal overlap with CR. Gene Ontology analysis revealed CR and TM5614 downregulated metabolic pathways, and both countered gene-length-dependent transcription decline, an emerging measure of an aging transcriptomic landscape. TM5614 presents as a CR mimic, offering an alternative to CR to extend healthspan.

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Life Sciences
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RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE29922815 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[modality].local:modality:sequencingenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title