Excel · study · 2026
H3K4me3 ChIP-seq Identifies EMT-TFs in TGF-β-Induced A549 cells
Listed in NCBI GEO
H3K4me3 marks active gene regions and broad H3K4me3 occupancy is associated with genes critical for cell identity and function.
Description
To identify novel EMT-inducing transcription factors (EMT-TFs), we analyzed changes in broad H3K4me3 occupancy during TGF-β-induced epithelial-to-mesenchymal transition (EMT) in A549 lung adenocarcinoma cells using H3K4me3 ChIP-seq.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE285nnn/GSE285671 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE285671 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1205414 ncbi.nlm.nih.gov/bioproject/PRJNA1205414 ↗
project · from NCBI GEO
- PubMed 42230580 pubmed.ncbi.nlm.nih.gov/42230580 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE285671 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |