Omics · study · 2026
QuantSeq 3′ mRNA sequencing of chronic lymphocytic leukemia and myelodysplastic syndrome samples
Listed in NCBI GEO
We performed QuantSeq 3′ mRNA sequencing to characterize gene expression profiles in chronic lymphocytic leukemia (CLL) and myelodysplastic syndrome (MDS) samples.
Description
The dataset includes 29 CLL samples and 65 MDS samples. RNA sequencing data were generated to enable transcriptome-wide assessment of gene expression and comparison of molecular patterns across the study cohorts.
Raw sequencing reads and processed gene-level expression data are provided to support downstream analyses of transcriptional variation among these hematologic malignancies.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE345nnn/GSE345463 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE345463 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1520455 ncbi.nlm.nih.gov/bioproject/PRJNA1520455 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE345463 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |