Data · dataset · 2026
Environmental circadian disruption alters rhythmicity of clock and epigenetic gene expression in SKH-1 female mouse livers
Listed in NCL Data
<p>Endogenous circadian rhythms are primarily entrained by environmental cues that are used to regulate the function of cells and peripheral tissues throughout the body.
Description
We found that disrupted light schedules – reflective of shift work conditions – demonstrated impaired gene expression throughout the 24-h day in core clock and epigenetically regulated genes. Dysregulated expression in these genes has been independently detected in the etiology of sleep-related diseases, suggesting epigenetic regulation as a potential mechanistic link between circadian disruption and health outcomes.
Because of this, we hypothesized that epigenetic regulatory factors are circadian expressed and can be dysregulated by environmental circadian disruption. In this study, we show rhythmic expression of both core clock and epigenetic genes in female SKH-1 mouse livers under normal circadian conditions and the subsequent effect of disrupted clocks thereafter. To address our hypothesis, we measured relative gene expression patterns in female mouse livers under healthy and disrupted clock conditions.
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In 5 of the 8 core clock genes (<i>Cry1, Cry2, Npas2, Nr1d1, Per2</i>), there was a significant loss of rhythmic expression. All active demethylases and <i>Zfp57</i> experienced a loss of rhythmicity due to clock disruption, while both <i>de novo</i> DNMTs, <i>Dnmt3a</i> and <i>Dnmt3b</i>, displayed a slight damping of rhythmicity in disrupted clock mice.</p>
Links
Where it is published
- DOI doi.org/10.6084/m9.figshare.34069773.v1 ↗
DOI / persistent id · from data ncl ac uk
Catalogue records · 1
- OAI-PMH record api.figshare.com/v2/oai?verb=GetRecord&metadataPrefix=oai_dc&identifier=oai%3Af… ↗
metadata API · from data ncl ac uk
Topics
Provenance · 1 source records, 15 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCL Data | oai:figshare.com:article/34069773 | 2 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[disease].local:disease:cancer | mapping · data ncl ac uk | vocabulary-mapper@1.0.0 | keywords['Cancer'] |
| concepts[field].anzsrc:field:310504 | mapping · data ncl ac uk | vocabulary-mapper@1.0.0 | keywords['Epigenetics'] |
| concepts[field].anzsrc:field:310505 | mapping · data ncl ac uk | vocabulary-mapper@1.0.0 | keywords['gene expression'] |
| concepts[field].anzsrc:group:3101 | mapping · data ncl ac uk | vocabulary-mapper@1.0.0 | keywords['Cell Biology'] |
| concepts[field].anzsrc:group:3105 | mapping · data ncl ac uk | vocabulary-mapper@1.0.0 | keywords['Genetics'] |
| concepts[field].local:field:chemistry | mapping · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[field].local:field:earth-environmental | mapping · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[field].local:field:medicine-health | mapping · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| concepts[field].local:field:psychology-behavioral | mapping · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| description | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | /metadata/dc/description |
| license | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | /metadata/dc/rights |
| publication_date | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | |
| title | source · data ncl ac uk | connector:data_ncl_ac_uk@1.0.0 | /metadata/dc/title |