Text · study · 2026
RIP-seq and N6-methyladenosine RIP-seq (MeRIP-seq) in UM-UC-3 cells
Listed in NCBI GEO
Cisplatin resistance and tumor relapse are the leading causes of the mortality in muscle-invasive bladder cancer (MIBC).
Description
Preceding evidence supported that basal/squamous subtype, N6-methyladenosine (m6A) modifications and hypoxia are associated with a reduced chemotherapy response. To explore the m6a modification in UM-UC-3 cells, we performed RNA immunoprecipitation with an antibody against m6a (No. 202003, Synaptic Systems, Germany) and IMP2 , and sequencing was performed using Illumina NovaSeq 6000.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE244nnn/GSE244048 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE244048 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1021166 ncbi.nlm.nih.gov/bioproject/PRJNA1021166 ↗
project · from NCBI GEO
Topics
- Stated by source
- Homo sapiens · Other
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · Sequencing 75%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE244048 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:other | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |