Omics · study · 2026
Epstein-Barr Virus Induced B cell Methionine Dependency is a Targetable Metabolic Vulnerability
Listed in NCBI GEO
EBV uses latency III oncoproteins to drive abnormal B cell proliferation to establish lifelong latency, and oncoprotein+ B cells correlate to pathology in autoimmune diseases such as systemic lupus erythematosus and multi-sclerosis.
Description
EBV-driven B cell outgrowth shows unique features that are different from both cancerous and cytokine-activated B cells, especially in their metabolism. Building on our previous observation that EBV+ tumors depend on methionine for viral epigenetic regulation, we tested whether EBV latency III program B cells share a similar phenotype.
Surprisingly, the effect of methionine restriction on latency III cells is distinct and far more drastic—reducing RPMI media methionine level to 10% completely blocked B cell transformation, and to 1% resulted in rapid death of LCL and latency III Burkitt cells. Transcriptomic and liquid chromatography mass spectrometry-based metabolomic analyses revealed that methionine restriction downregulated genes related to the pentose phosphate pathway which supports cystine reduction, and upregulated genes related to ferroptosis, a lipid peroxidation (LPO)-mediated cell death.
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Isotope-labeled amino acid tracing indicated that methionine was shunt to cysteine biosynthesis pathway. Methionine restriction can be rescued by a combination of quenching LPO (Fer-1 and DFO) and removing toxic cystine buildup (NAC and penicillamine). In mice models, either dietary methionine restriction or injection of engineered methioninase abolished lymphoblastoid cell line tumor growth without having effects on body weight, and refractory tumor cells upregulated pathways against LPO, and downregulated cystine intake, highlighting methionine’s multiple roles in antagonizing LPO and redox pressure via modulating cysteine metabolism.
In tonsil organoid model, moderate methionine restriction blocks EBV+ cell outgrowth but did not affect T cell activation and normal germinal center development, implying therapeutic potential. In a B cell transformation assay with a panel of loss-of-function BAC viruses, we identify EBNA2, EBNA-LP, and LMP2A deletion provided protection.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE336nnn/GSE336950 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE336950 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1483620 ncbi.nlm.nih.gov/bioproject/PRJNA1483620 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE336950 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |