Omics · study · 2026
Mouse embryo transcriptomes after two-cell blastomere separation
Listed in NCBI GEO
This study profiled mouse preimplantation embryos by Smart-seq2 RNA-seq to assess whether separation of late two-cell blastomeres alters the developmental transcriptomic program.
Description
The dataset includes control 8-cell embryos, split morula-stage embryos derived from two-cell blastomeres, control morula embryos, split blastocyst-stage embryos derived from two-cell blastomeres, and control blastocysts. The data were used to compare global transcriptomic similarity, developmental-stage effects, sample correlations, hierarchical clustering and pseudotime trajectories between split embryos and intact controls.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE329nnn/GSE329609 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329609 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1460311 ncbi.nlm.nih.gov/bioproject/PRJNA1460311 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE329609 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |