Excel · study · 2026
Bulk RNA Sequencing Reveals Differential Gene Expression Between Mesothelial Cells (MCs) and Cancer Associated Mesothelial Cells (CAMCs)
Listed in NCBI GEO
This study presents a bulk RNA-sequencing analysis comparing mouse primary mesothelial cells (MCs) and cancer-associated mesothelial cells (CAMCs).
Description
MCs were treated for 72 hours with conditioned media derived from KPCA cancer cells or with vehicle control to induce CAMC-like reprogramming. RNA was extracted and subjected to bulk transcriptomic profiling to identify differentially expressed genes and associated biological pathways.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE330nnn/GSE330590 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE330590 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1464651 ncbi.nlm.nih.gov/bioproject/PRJNA1464651 ↗
project · from NCBI GEO
- PubMed 42532631 pubmed.ncbi.nlm.nih.gov/42532631 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE330590 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |