Excel · study · 2026
The SWI/SNF complex subunit Smarce1 controls cardiomyocyte proliferation via Jak/Stat3 signaling [ATAC-seq]
Listed in NCBI GEO
Description
To define Smarce1 as an epigenetic key-regulator of pro-proliferative Jak/Stat3 signlaing that controls cell cycle activity in zebrafish embryonic hearts, we performed one time of Assay for Transposase-Accessible Chromatin (ATAC)-sequencing technology using hearts from our identified zebrafish line 'heart of stone (hos)', smarce1-mutated line at 96 hours post fertilization.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE223nnn/GSE223720 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE223720 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA927500 ncbi.nlm.nih.gov/bioproject/PRJNA927500 ↗
project · from NCBI GEO
- PubMed 41794942 pubmed.ncbi.nlm.nih.gov/41794942 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Danio rerio · Genome binding/occupancy profiling by high throughput sequencing
- From keywords
- Life Sciences
- Inferred from text
- Heart 75%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE223720 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[anatomy].local:anatomy:heart | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:7955 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |