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Data · dataset · 2024

Pan-Cancer chromatin analysis of the human vtRNA genes - Supplementary Tables

Listed in Redata

Tables S1-S5.

Description

ATAC-seq and DNA methylation data for vtRNA promoters in primary tumors and normal adjacent tissue samples. CSV spreadsheets: Table_S1_ATAC-seq_data_500bp: All ATAC-seq data of vtRNAs promoter (500bp) data for primary tumor samples; Table_S2_DNA_methylation_500bp: All DNA methylation data and ATAC-seq data of vtRNAs promoter (500bp) data for total primary tumor and normal adjacent samples; Table_S3_DNA_methylation_NORMAL: All DNA methylation data of vtRNAs promoter (500bp) data for normal adjacent samples; Table_S4_DNA_methylation_TUMOR: All DNA methylation data of vtRNAs promoter (500bp) data for primary tumor samples; Table_S5_Normal_&_Tumor_matched: All DNA methylation data of vtRNAs promoter (500bp) data for primary tumor and normal adjacent samples.

Tables S11-S14. ATAC-seq and DNA methylation data for vtRNA promoters in primary tumors and the associated Immune Subtypes data. CSV spreadsheets : Table_S11_Immune_Subtypes_DNA_methylation_data: All DNA methylation data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples; Table_S12_Spearman_corr_vtRNAs_Immune_Subtypes_DNA_methylation_data: Spearman correlation values of DNA methylation data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples; Table_S13_Immune_Subtypes_ATAC-seq_data: All ATAC-seq data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples; Table_S14_Spearman_corr_vtRNAs_Immune_Subtypes_ATAC-seq_data: Spearman correlation values of ATAC-seq data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples.

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Catalogue records · 1

Topics

From keywords
Medicine & Health
Inferred from text
Cancer 65% · Oncology and carcinogenesis 71%
Provenance · 1 source records, 8 field assertions
SourceKeyLast seenRaw
Redatadoi:10.5281/zenodo.47844739 d agoJSON v1
FieldAssertionExtractorEvidence
concepts[disease].local:disease:cancerenrichment · redata anii org uykeyword-concept-rules@1.0.0title+description (65%)
concepts[field].anzsrc:group:3211enrichment · redata anii org uytaxonomy-embedding@1.1.0title+keywords+description (71%)
concepts[field].local:field:medicine-healthmapping · redata anii org uyconnector:redata_anii_org_uy@1.0.0/subjects
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