Data · dataset · 2024
Pan-Cancer chromatin analysis of the human vtRNA genes - Supplementary Tables
Listed in Redata
Tables S1-S5.
Description
ATAC-seq and DNA methylation data for vtRNA promoters in primary tumors and normal adjacent tissue samples. CSV spreadsheets: Table_S1_ATAC-seq_data_500bp: All ATAC-seq data of vtRNAs promoter (500bp) data for primary tumor samples; Table_S2_DNA_methylation_500bp: All DNA methylation data and ATAC-seq data of vtRNAs promoter (500bp) data for total primary tumor and normal adjacent samples; Table_S3_DNA_methylation_NORMAL: All DNA methylation data of vtRNAs promoter (500bp) data for normal adjacent samples; Table_S4_DNA_methylation_TUMOR: All DNA methylation data of vtRNAs promoter (500bp) data for primary tumor samples; Table_S5_Normal_&_Tumor_matched: All DNA methylation data of vtRNAs promoter (500bp) data for primary tumor and normal adjacent samples.
Tables S11-S14. ATAC-seq and DNA methylation data for vtRNA promoters in primary tumors and the associated Immune Subtypes data. CSV spreadsheets : Table_S11_Immune_Subtypes_DNA_methylation_data: All DNA methylation data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples; Table_S12_Spearman_corr_vtRNAs_Immune_Subtypes_DNA_methylation_data: Spearman correlation values of DNA methylation data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples; Table_S13_Immune_Subtypes_ATAC-seq_data: All ATAC-seq data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples; Table_S14_Spearman_corr_vtRNAs_Immune_Subtypes_ATAC-seq_data: Spearman correlation values of ATAC-seq data of vtRNAs promoter (500bp) and Immune Subtypes data for primary tumor samples.
Links
Where it is published
- Dataverse dataset page redata.anii.org.uy/dataset.xhtml?persistentId=doi%3A10.5281%2Fzenodo.4784473 ↗
landing page · from redata anii org uy
- DOI doi.org/10.5281/zenodo.4784473 ↗
DOI / persistent id · from redata anii org uy
Catalogue records · 1
- Dataverse API redata.anii.org.uy/api/datasets/:persistentId/?persistentId=doi%3A10.5281%2Fzenod… ↗
metadata API · from redata anii org uy
Topics
- From keywords
- Medicine & Health
- Inferred from text
- Cancer 65% · Oncology and carcinogenesis 71%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| Redata | doi:10.5281/zenodo.4784473 | 9 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| concepts[disease].local:disease:cancer | enrichment · redata anii org uy | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].anzsrc:group:3211 | enrichment · redata anii org uy | taxonomy-embedding@1.1.0 | title+keywords+description (71%) |
| concepts[field].local:field:medicine-health | mapping · redata anii org uy | connector:redata_anii_org_uy@1.0.0 | /subjects |
| created_date | source · redata anii org uy | connector:redata_anii_org_uy@1.0.0 | |
| description | source · redata anii org uy | connector:redata_anii_org_uy@1.0.0 | /description |
| publication_date | source · redata anii org uy | connector:redata_anii_org_uy@1.0.0 | |
| title | source · redata anii org uy | connector:redata_anii_org_uy@1.0.0 | /name |
| updated_date | source · redata anii org uy | connector:redata_anii_org_uy@1.0.0 |