Omics · study · 2026
SenCat: Redefining human cell senescence through multiomic profiling of multiple senescent cell types
Listed in NCBI GEO
There is an urgent need to comprehensively catalog senescence markers across a wide range of cell types in an organism.
Description
Here, we profiled the transcriptomes and proteomes in over 30 senescence paradigms employing 14 different primary human cell types. Our results indicate that senescent cells from all tissue types do not share a unique marker, but they do share in the activation of specific metabolic pathways and damage response pathways to elicit tissue repair.
Importantly, considering combinations of some of the most widely shared senescence markers validated the presence of senescent-like cells in mice through single-cell RNA-sequencing and immunostaining approaches. The enclosed catalog represents a much-needed resource to identify senescent cells across tissues in the body.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE284nnn/GSE284666 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE284666 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1200021 ncbi.nlm.nih.gov/bioproject/PRJNA1200021 ↗
project · from NCBI GEO
- PubMed 42276073 pubmed.ncbi.nlm.nih.gov/42276073 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
Provenance · 1 source records, 7 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE284666 | 11 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |