Omics · study · 2026
Persistent ER stress in macrophages fuels age-related inflammation and vulnerability to infection
Listed in NCBI GEO
Aging is accompanied by a state of chronic, low-grade inflammation known as inflammaging that underlies increased susceptibility to infection and many age-related pathologies.
Description
Although macrophages are central to immune regulation and inflammation, the molecular mechanisms driving their age-associated dysfunction remain incompletely defined. Here, we performed bulk RNA-sequencing on FACS-sorted peritoneal macrophages from young and aged mice.
Analysis of differentially expressed genes revealed that genes upregulated in aged macrophages were significantly enriched for pathways related to "response to interferon-beta" and "response to interferon-gamma". Further investigation of our RNA-seq data for upstream mediators of these genes showed that Stat1 was markedly upregulated in aged macrophages. These transcriptomic findings suggest that the chronic activation of ER UPR in aged macrophages drives an enhanced ISG program, representing a potential mechanism for inflammaging.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE304nnn/GSE304706 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE304706 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1302373 ncbi.nlm.nih.gov/bioproject/PRJNA1302373 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 65%
Provenance · 1 source records, 8 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE304706 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |