Omics · study · 2026
Fructose feeding on Asxl1-mutant clonal hematopoiesis [single-cell RNA-seq]
Listed in NCBI GEO
Description
Single-cell profiling of wild-type (WT) or mutant hematopoietic stem and progenitor cell (HSPC)-enriched hematopoietic cells from the bone marrow of mice harboring Asxl1Y588X clonal hematopoiesis of intermediate potential (CHIP) after 40 weeks of high-fructose corn syrup (HFCS) feeding to determine genes involved in the inflammatory response to HFCS between WT and Asxl1Y588X hematopoietic cells. These data provide new information on the difference in the inflammatory, pro-survival, and proliferative responses between WT and Asxl1Y588X hematopoietic cells after fructose feeding.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE276nnn/GSE276811 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE276811 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1159141 ncbi.nlm.nih.gov/bioproject/PRJNA1159141 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Biochemistry and cell biology 69% · RNA sequencing 65% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE276811 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].anzsrc:group:3101 | enrichment · NCBI GEO | taxonomy-embedding@1.0.0 | title+keywords+description (69%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |