Omics · study · 2026
Single cell multiomic profiling of heterogenous PROCR+ cells in mouse mammary gland [scATAC-Seq]
Listed in NCBI GEO
PROCR has been identified as a surface marker on cyclic mammary stem cells (MaSCs) in the basal layer of the mouse mammary gland.
Description
Due to their limited numbers, this population has not been clearly characterized. We performed single-cell multi-omics profiling of mammary epithelial cells enriched for PROCR+ cells.
With an unprecedented number of PROCR+ cells, we found that this population is highly heterogeneous and identified the subpopulation most likely to resemble MaSCs. By integrating scRNA-seq and scATAC-seq data, we constructed the transcriptional regulatory network of mammary development and uncovered potential master regulators involved in lineage commitment. Motivated by the connection between PROCR's roles in normal mammary gland development and tumorigenesis, we further investigated this subpopulation in a cohort of breast cancer patients.
Read the rest (1 more)
As PROCR is a therapeutic target for a subset of TNBC, our study clarifies the nature of PROCR+ MaSCs and suggests the need for additional markers for patient stratification.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE306nnn/GSE306322 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE306322 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1310468 ncbi.nlm.nih.gov/bioproject/PRJNA1310468 ↗
project · from NCBI GEO
Topics
- Stated by source
- Genome binding/occupancy profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 9 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE306322 | 12 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |