Omics · study · 2026
Transcriptomic profiling of human iPSC-derived pruriceptors using single-nucleus and bulk RNA sequencing
Listed in NCBI GEO
Human induced pluripotent stem cells (iPSCs) were differentiated into pruriceptor-enriched sensory neurons via transcription factor overexpression (NGN1 and ISL1).
Description
Both single-nucleus RNA sequencing (snRNA-seq) and bulk RNA sequencing were performed to characterize transcriptional changes associated with neuronal differentiation and pruriceptor specification. The snRNA-seq dataset captures cell-type-specific gene expression profiles, while the bulk RNA-seq dataset provides complementary transcriptome-wide measurements across biological replicates.
Together, these datasets provide a resource for studying human sensory neuron specification and pruriceptor-associated gene expression programs.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE329nnn/GSE329269 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE329269 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1458252 ncbi.nlm.nih.gov/bioproject/PRJNA1458252 ↗
project · from NCBI GEO
- PubMed 42425092 pubmed.ncbi.nlm.nih.gov/42425092 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 65%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE329269 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |