Omics · study · 2026
scRNA-seq of mouse cochlea organoid cells
Listed in NCBI GEO
Neonatal mouse cochlear epithelium retains regenerative capacity, attributed to the greater epithelial ridge (GER) cells.
Description
GER cells proliferate to form organoids and give rise to nascent hair cells and supporting cells. To investigate the growth-promoting pathways in GER cells, we generated organoids from highly enriched mouse GER cells and performed single-cell RNA sequencing.
Data analysis revealed changes in gene expression in GER-derived cells during the early growth phase of organoid development. Integrating single-cell RNA sequencing data with in vitro and in vivo functional assays, we identified galectins and Myc activity as essential regulators of GER cell proliferation.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE326nnn/GSE326100 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE326100 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1443350 ncbi.nlm.nih.gov/bioproject/PRJNA1443350 ↗
project · from NCBI GEO
- PubMed 42282633 pubmed.ncbi.nlm.nih.gov/42282633 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE326100 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |