Chicken gut-lung axis single-cell RNA-seq log-normalized expression matrices following oral cholera toxin administration

The deposited matrices cover jejunum, cecal tonsil, and lung tissues from CT-treated and control broiler chickens and together represent 47,364 high-quality transcriptomes: 15,547 jejunum cells, 18,023 cecal tonsil cells, and 13,794 lung cells.</p><p><br></p><p dir="ltr">Files included:</p><ul><li>lung_expression_matrix_logNormalized.csv: log-normalized expression matrix for lung cells.</li><li>- jejunum_expression_matrix_logNormalized.csv: log-normalized expression matrix for jejunum cells.</li><li>- cecal_tonsil_expression_matrix_logNormalized.csv: log-normalized expression matrix for cecal tonsil cells.</li></ul><p dir="ltr">The dataset supports analyses of tissue-specific cellular composition, differential gene expression, pathway enrichment, transcription factor regulon activity, and predicted intercellular communication across the chicken gut-lung axis.</p>