Omics · study · 2026
Myeloid Cell States in Influenza-Associated Pulmonary Aspergillosis are Shaped by Iron Overload and Metabolic Reprogramming
Listed in NCBI GEO
We performed single-cell RNA sequencing using the 10x Genomics platform to define how prior influenza A virus (IAV) infection reshapes pulmonary monocyte and macrophage responses during secondary Aspergillus fumigatus infection in a murine model of influenza-associated pulmonary aspergillosis (IAPA).
Description
IAPA is a severe complication of influenza ICU-admitted patients, but the host mechanisms that drive susceptibility remain incompletely understood.
To address this, we profiled CD11b+ monocyte/macrophage-enriched lung cells from naïve mice, IAV-only mice, A. fumigatus (CEA10)-only mice, and IAV+A. fumigatus (Coinfection) mice. This dataset provides a high-resolution view of how prior influenza infection reshapes innate immune cell states during secondary A. fumigatus infection. These data establish a resource for investigating innate immune dysregulation in IAPA and offer new insight into how influenza-driven remodeling of the lung myeloid compartment impairs monocyte and macrophage responses to secondary fungal challenge.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE328nnn/GSE328605 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE328605 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1455964 ncbi.nlm.nih.gov/bioproject/PRJNA1455964 ↗
project · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- RNA sequencing 75% · Sequencing 75% · Single-cell RNA sequencing 75%
Provenance · 1 source records, 10 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE328605 | 13 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:single-cell-rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |