Omics · study · 2026
Melanoma-derived exosomal miRNAs and keratinocyte-derived LL-37 define an epidermal–tumor arms race in melanoma
Listed in NCBI GEO
Melanoma progression involves dynamic interactions between tumor cells and the surrounding epidermal microenvironment.
Description
The cathelicidin antimicrobial peptide LL-37, expressed by keratinocytes, has been implicated in tumor-host defense; however, its transcriptomic impact on melanoma cells and its in vivo relevance remain incompletely characterized. Here, we performed bulk RNA sequencing of LL-37-treated A375 human melanoma cells in vitro and of tumor-bearing dorsal skin from K14CreCampf/f (cKO) and wild type mice (WT) subjected to topical imiquimod stimulation in vivo, to elucidate the transcriptomic landscape underlying LL-37-mediated suppression of melanoma progression.
Links
Get the data
- GEO FTP directory ftp.ncbi.nlm.nih.gov/geo/series/GSE334nnn/GSE334049 ↗
download · from NCBI GEO
Where it is published
- GEO accession page ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GSE334049 ↗
landing page · from NCBI GEO
Documentation and papers
- PRJNA1473650 ncbi.nlm.nih.gov/bioproject/PRJNA1473650 ↗
project · from NCBI GEO
- PubMed 42593966 pubmed.ncbi.nlm.nih.gov/42593966 ↗
publication · from NCBI GEO
Topics
- Stated by source
- Expression profiling by high throughput sequencing · Homo sapiens · Mus musculus
- From keywords
- Life Sciences
- Inferred from text
- Cancer 65% · RNA sequencing 75% · Sequencing 75%
Provenance · 1 source records, 11 field assertions
| Source | Key | Last seen | Raw |
|---|---|---|---|
| NCBI GEO | GSE334049 | 14 d ago | JSON v1 |
| Field | Assertion | Extractor | Evidence |
|---|---|---|---|
| access_level | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[disease].local:disease:cancer | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (65%) |
| concepts[field].local:field:life-sciences | mapping · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencing | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /gdstype |
| concepts[modality].local:modality:rna-seq | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[modality].local:modality:sequencing | enrichment · NCBI GEO | keyword-concept-rules@1.0.0 | title+description (75%) |
| concepts[organism].NCBITaxon:10090 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| concepts[organism].NCBITaxon:9606 | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /taxon |
| description | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /summary |
| publication_date | source · NCBI GEO | connector:ncbi_geo@1.0.0 | |
| title | source · NCBI GEO | connector:ncbi_geo@1.0.0 | /title |