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Omics · study · 2026

Selective Translation of ZNF281 as Part of the Integrated Stress Response System has Therapeutic Relevance for Cardio-Oncology

Listed in NCBI GEO

This study aims to investigate the role of ZNF281 in cardiomyocyte function and tumor biology by integrating RNA-seq and ChIP-seq datasets.

Description

Using a C57BL/6 mouse model, we isolated cardiomyocytes from ZNF281 overexpression (OE) and knockdown (Kd) mice, along with their respective controls, to analyze transcriptomic changes and ZNF281 genome-wide binding patterns. Additionally, we included tumor samples from nude mice, specifically A549 ZNF281 knockout (KO) tumors and parental A549 tumors, to explore the differential regulation and binding patterns of ZNF281 between cardiac tissue and tumors.

RNA-seq was performed to identify differentially expressed genes regulated by ZNF281 in both contexts, while ChIP-seq was conducted to map ZNF281 DNA-binding sites and its role in transcriptional regulation. This study will provide insights into the context-dependent functions of ZNF281 in the heart and tumors, enhancing our understanding of its role in cardiac biology and cancer progression.

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Topics

From keywords
Life Sciences
Inferred from text
Cancer 75% · Heart 75% · RNA sequencing 65%
Provenance · 1 source records, 12 field assertions
SourceKeyLast seenRaw
NCBI GEOGSE32589814 d agoJSON v1
FieldAssertionExtractorEvidence
access_levelsource · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[anatomy].local:anatomy:heartenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[disease].local:disease:cancerenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (75%)
concepts[field].local:field:life-sciencesmapping · NCBI GEOconnector:ncbi_geo@1.0.0
concepts[method].geo_series_type:expression-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[method].geo_series_type:genome-binding-occupancy-profiling-by-high-throughput-sequencingsource · NCBI GEOconnector:ncbi_geo@1.0.0/gdstype
concepts[modality].local:modality:rna-seqenrichment · NCBI GEOkeyword-concept-rules@1.0.0title+description (65%)
concepts[organism].NCBITaxon:10090source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
concepts[organism].NCBITaxon:9606source · NCBI GEOconnector:ncbi_geo@1.0.0/taxon
descriptionsource · NCBI GEOconnector:ncbi_geo@1.0.0/summary
publication_datesource · NCBI GEOconnector:ncbi_geo@1.0.0
titlesource · NCBI GEOconnector:ncbi_geo@1.0.0/title